Publications | Biophysics Graduate Program

Title	Investigators	Year
Modulation of the rate of cardiac muscle contraction by troponin C constructs with various calcium binding affinities	Catalina Norman, Jack A Rall, Svetlana B Tikunova, Jonathan P Davis	2007
Modulation of the redox properties of the flavin cofactor through hydrogen-bonding interactions with the N(5) atom: role of alphaSer254 in the electron-transfer flavoprotein from the methylotrophic bacterium W3A1	Kun-Yun Yang, Richard P Swenson	2007
Myocardial ischemia results in tetrahydrobiopterin (BH4) oxidation with impaired endothelial function ameliorated by BH4	Cristian Dumitrescu, Roberto Biondi, Yong Xia, Arturo J Cardounel, Lawrence J Druhan, Giuseppe Ambrosio, Jay L Zweier	2007
N-hydroxy-pyrroline modification of verapamil exhibits antioxidant protection of the heart against ischemia/reperfusion-induced cardiac dysfunction without compromising its calcium antagonistic activity	Rajarsi Mandal, Vijay Kumar Kutala, Mahmood Khan, Iyyapu K Mohan, Saradhadevi Varadharaj, Arun Sridhar, Cynthia A Carnes, Tamás Kálai, Kálmán Hideg, Periannan Kuppusamy	2007
Nonresonance Raman study of the flavin cofactor and its interactions in the methylotrophic bacterium W3A1 electron-transfer flavoprotein	Kun-Yun Yang, Richard P Swenson	2007
O2 delivery and redox state are determinants of compartment-specific reactive O2 species in myocardial reperfusion	Jason D Stoner, Thomas L Clanton, Sverre E Aune, Mark G Angelos	2007
Oxygen, the lead actor in the pathophysiologic drama: enactment of the trinity of normoxia, hypoxia, and hyperoxia in disease and therapy	Aditi C Kulkarni, Periannan Kuppusamy, Narasimham Parinandi	2007
Phycoremediation of heavy metals using transgenic microalgae	Sathish Rajamani, Surasak Siripornadulsil, Vanessa Falcao, Moacir Torres, Pio Colepicolo, Richard Sayre	2007
Potency of a tau fibrillization inhibitor is influenced by its aggregation state	Erin E Congdon, Mihaela Necula, Robert D Blackstone, Jeff Kuret	2007
Potent inhibition of native TREK-1 K+ channels by selected dihydropyridine Ca2+ channel antagonists	Haiyan Liu, Judith A Enyeart, John J Enyeart	2007
Pyrin levels in human monocytes and monocyte-derived macrophages regulate IL-1beta processing and release	Sudarshan Seshadri, Michelle D Duncan, Judith M Hart, Mikhail A Gavrilin, Mark D Wewers	2007
Quasi Monte Carlo-based isotropic distribution of gradient directions for improved reconstruction quality of 3D EPR imaging	Rizwan Ahmad, Yuanmu Deng, Deepti S Vikram, Bradley Clymer, Parthasarathy Srinivasan, Jay L Zweier, Periannan Kuppusamy	2007
RL-SAGE and microarray analysis of the rice transcriptome after Rhizoctonia solani infection	R C Venu, Yulin Jia, Malali Gowda, Melissa H Jia, Chatchawan Jantasuriyarat, Eric Stahlberg, Huameng Li, Andrew Rhineheart, Prashanth Boddhireddy, Pratibha Singh, Neil Rutger, David Kudrna, Rod Wing, James C Nelson, Guo-Liang Wang	2007
Robust analysis of 5'-transcript ends: a high-throughput protocol for characterization of sequence diversity of transcription start sites	Malali Gowda, Huameng Li, Guo-Liang Wang	2007
Skeletal myoblasts transplanted in the ischemic myocardium enhance in situ oxygenation and recovery of contractile function	Mahmood Khan, Vijay Kumar Kutala, Deepti S Vikram, Sheik Wisel, Simi M Chacko, M Lakshmi Kuppusamy, Iyyapu K Mohan, Jay L Zweier, Pawel Kwiatkowski, Periannan Kuppusamy	2007
Solution NMR of large molecules and assemblies	Mark P Foster, Craig A McElroy, Carlos D Amero	2007
Structure of the Nitrosomonas europaea Rh protein	Xin Li, Sanjay Jayachandran, Hiep-Hoa T Nguyen, Michael K Chan	2007
Support for a potential role of E. coli oligopeptidase A in protein degradation	Rinku Jain, Michael K Chan	2007
The axon-dendrite targeting of Kv3 (Shaw) channels is determined by a targeting motif that associates with the T1 domain and ankyrin G	Mingxuan Xu, Ruifeng Cao, Rui Xiao, Michael X Zhu, Chen Gu	2007
The Chlamydomonas genome reveals the evolution of key animal and plant functions	Sabeeha S Merchant, Sathish Rajamani, Richard T Sayre	2007
The plateau outward current in canine ventricle, sensitive to 4-aminopyridine, is a constitutive contributor to ventricular repolarization	A Sridhar, D N Q da Cunha, V A Lacombe, Q Zhou, J J Fox, R L Hamlin, C A Carnes	2007
Trans cooperativity by a split DNA recombinase the central and catalytic domains of bacteriophage lambda integrase cooperate in cleaving DNA substrates when the two domains are not covalently linked	Srisunder Subramaniam, Hari B Kamadurai, Mark P Foster	2007
Transverse oriented electric field re-entrant resonator (TERR) with automatic tuning and coupling control for EPR spectroscopy and imaging of the beating heart	Guanglong He, Cristian Dumitrescu, Sergey Petryakov, Yuanmu Deng, Eric Kesselring, Jay L Zweier	2007
Uniform distribution of projection data for improved reconstruction quality of 4D EPR imaging	Rizwan Ahmad, Deepti S Vikram, Bradley Clymer, Lee C Potter, Yuanmu Deng, Parthasarathy Srinivasan, Jay L Zweier, Periannan Kuppusamy	2007